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Publications, Reports, & Presentations

Curriculum Vitae

Google Scholar Profile

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*refers to SD Mines graduate or undergraduate student author

2016

  • Gonzalez-Estrella, J., Asato, C., Jerke*, A., Stone, J.J., Gilcrease, P., Effect of structural carbohydrates and lignin content on the anaerobic digestion of paper and paper board materials by anaerobic granular sludge.  Biotechnology and Bioengineering.  http://dx.doi.org/10.1002/bit.26228

  • Isola*, C., Sieverding, H.L., Raghunathan, R., Sibi, M., Webster, D., Sivaguru, J., Stone, J.J. Life cycle assessment of photodegradable polymeric material derived from renewable bioresources. Journal of Cleaner Production. http://dx.doi.org/10.1016/j.jclepro.2016.10.177

  • Shrestha*, N., Chilkoor*, G., Wilder*, J., Gadhamshetty, V., Stone, J.J., 2016. Potential water resource impacts of hydraulic fracturing from unconventional oil production in the Bakken shale. Water Research. http://dx.doi.org/10.1016/j.watres.2016.11.006

  • Sieverding, H.L., Clay, D.E., Khan, E., Sivaguru, J., Pattabiraman, M., Koodali, R.T., Ndiva-Mongoh, M., Stone, J.J., A sustainable rural food-energy-water nexus framework for the northern Great Plains. Agriculture
    and Environmental Letters. 1(1) 1-4. https://dx.doi.org/10.2134/ael2016.02.0008

  • Asato*, C.M., Gonzalez-Estrella, J., Jerke*, A.C., Bang, S.S., Stone, J.J., Gilcrease, P.C., Batch anaerobic digestion of synthetic military base food waste and cardboard mixtures. Bioresource Technology. 216(2016): 894-903. https://dx.doi.org/10.1016/j.biortech.2016.06.033

  • Sharma*, R.K., Putirka, K.D., Stone, J.J., Stream sediment geochemistry of the upper Cheyenne River watershed within the abandoned uranium mining region of the southern Black Hills, South Dakota, USA. Environmental Earth Sciences. 75(9) 1-12. https://dx.doi.org/10.1007/s12665-016-5522-8

  • Hengen*, T.J., Sieverding, H.L., Cole, N.A., Ham, J.M., Stone, J.J., Eco-efficiency model for evaluating feedlot rations in the Great Plains, United States. Journal of Environmental Quality. 45(4): 1234-1242. https://dx.doi.org/10.2134/jeq2015.09.0464

  • Hengen*, T., Sieverding, H., Stone, J.J., Lifecycle assessment analysis of engineered stormwater control methods common to urban watersheds. Journal of Water Resources Planning and Management. 142(7): 04016016. https://dx.doi.org/10.1061/(ASCE)WR.1943-5452.0000647

  • Johnson, R.H., Truax*, R.A., Lankford, D.A., Stone, J.J., Sorption testing and generalized composite surface complexation models for determining uranium sorption parameters at a proposed in-situ recovery site. Mine Water and the Environment. https://dx.doi.org/10.1007%2Fs10230-016-0384-6

  • Sieverding, H.L., Zhao, X., Wei, L., Stone, J.J., Life-cycle assessment of oilseeds for biojet production using localized cold-press extraction. Journal of Environmental Quality. 45(3): 967-976.  https://dx.doi.org/10.2134/jeq2015.06.0313

2015
2014

  • Clay, D., Clay, S., Reitsma, K., Dunn, B., Calrson, G., Horvath, D., Stone, J.J., 2014. Does the conversion of grasslands to row crop production in semi-arid areas threaten global food security?  Global Food Security. 3(1):
    22-30. http://dx.doi.org/10.1016/j.gfs.2013.12.002

  • Hengen*, T., Squillace*, M., O’Sullivan, A., Stone, J.J., 2014. Life cycle assessment analysis of active and passive acid mine drainage treatment technologies.  Resources, Conservation and Recycling. 86: 160-167.  http://dx.doi.org/10.1016/j.resconrec.2014.01.003

  • Troyer, L., Stone, J.J., Borch, T.  2014. Impact of biogeochemical redox processes on the fate and transport of As and U at an abandoned uranium mine site: An X-ray absorbance spectroscopy study.  Environmental Chemistry.  11(1): 18-27. http://dx.doi.org/10.1071/EN13129

2013

  • Lupo*, C., Clay, D., Benning, J., Stone, J.J., 2013. A life cycle assessment of the beef cattle production system for the Northern Great Plains, US.  Journal of Environmental Quality. 42(5): 1386-1394.   http://dx.doi.org/10.2134/jeq2013.03.0101

  • Betemariam*, H., Davis, A., Stetler, L., McCutcheon*, C., Desutter, T., Penn, M., Stone, J.J., 2013. Geochemical behavior and watershed influences associated with sediment-bound mercury for South Dakota lakes and impoundments.  Water, Air, and Soil Pollution.  (2013)225 1497-1511. http://dx.doi.org/10.1007/s11270-013-1497-1

  • Lupo, C* and Stone, J.J., 2013. Bulk atmospheric mercury fluxes for the Northern Great Plains U.S. Water, Air, and Soil Pollution.  224(2013) 1437-1449.  http://dx.doi.org/10.1007/s11270-013-1437-0

2012

  • Dreher*, T., Mott, H., Lupo*, C., Oswald*, A., Clay, S., Stone, J.J., 2012. Effects of chlortetracycline amended feed on anaerobic sequencing batch reactor performance of swine manure digestion.  Bioresource Technology.  125(2012) 65-74 http://dx.doi.org/10.1016/j.biortech.2012.08.077. 

  • Clay, D., Chang, J., Clay, S., Stone, J.J., Gelderman, R., Carlson, G., Reitsma, K., Jones, M., Janssen, L., Schumacher, T., 2012. Corn yields and no-tillage affects carbon sequestration and carbon footprints. Agronomy Journal. 104(3) 763-770.  http://dx.doi.org/10.2134/agronj2011.0353.

  • Clay, D., Carlson, G., Clay, S., Stone, J.J., Reitsma, D., Gelderman, R., 2012. Great Plains soils may be C sinks.  Better Crops. 96(2) 22-24.  http://www.ipni.net/publication/bettercrops.nsf

  • Stone, J.J., Dollarhide*, C., Benning, J., Carlson, C., Clay, D., 2012. The life cycle impacts of feed for modern Northern Great Plains U.S. swine production. Agricultural Systems. 106(1) 1-10.  http://dx.doi.org/10.1016/j.agsy.2011.11.002.

  • Larson*, L., Kipp*, G., Mott, H., Stone, J.J.  2012. Sediment pore-water interactions associated with transport of arsenic and uranium within a watershed impacted by historical uranium mining activity, North Cave Hills region, South Dakota. Applied Geochemistry. 27(4) 879-891.  http://dx.doi.org/10.1016/j.apgeochem.2012.01.008

2011

  • Stone, J.J., Oswald*, A., Lupo*, C, Clay, S., Mott, H., 2011. Impact of chlortetracycline on sequencing batch reactor performance for swine manure treatment. Bioresource Technology. 102(2011): 7807–7814. http://dx.doi.org/10.1016/j.biortech.2011.06.038

  • Stone, J.J., McCutcheon*, C., Stetler, L., Chipps, S., 2011. Interrelationships between fish tissue mercury concentrations and water quality for South Dakota natural lakes and impoundment. Water, Air and Soil Pollution.  222(1-4): 337-349. http://dx.doi.org/10.1007/s11270-011-0828-3

  • Stone, J.J., Dreis*, E., Lupo*, C., Clay, S., 2011. Land application of tylosin and chlortetracycline swine manure: impacts to soil nutrients and soil microbial community structure.  Journal of Environmental Science and Health, Part B Pesticides, Food Contaminants, and Agricultural Wastes.  46: 1-11. http://www.tandfonline.com/doi/abs/10.1080/03601234.2011.603988      

  • Larson*, L., Stone, J.J., 2011. Sediment-bound arsenic and uranium within the Bowman-Haley Reservoir, North Dakota.  Water, Air, and Soil Pollution. 219(1): 27-42. http://dx.doi.org/10.1007/s11270-010-0681-9

  • Hayer, C., Chipps, S., Stone, J.J., 2011. Influence of physiochemical and watershed characteristics on mercury concentration in walleye, Sander vitreus, M. Bulletin of Environmental Contamination and Toxicology.  86(2): 163-167.  http://dx.doi.org/10.1007/s00128-010-0166-y  

  • Stone, J.J., Aurand*, K., Dollarhide*, C., Jinka*, R., Thaler, R., Clay, D., Clay, S., 2011. Determination of environmental impacts of antimicrobial usage for Northern Great Plains U.S. swine production facilities:  a life cycle assessment approach.  International Journal of Life Cycle Assessment. 16(1): 27-39. http://dx.doi.org/10.1007/s11367-010-0241-y

  • Hansen, R., Stone, J.J. 2011. Mercury total maximum daily load evaluation for the State of South Dakota South Dakota.  Prepared for the Department of Environment and Natural Resources, Pierre, SD.

  • Stone, J.J. 2011.  Final Report: Phase I data collection and assessment for South Dakota mercury TMDL development.  Report No. CEE 05-11.  Department of Civil and Environmental Engineering, South Dakota School of Mines and Technology.  Prepared for South Dakota Department of Environment and Natural Resources, Pierre, SD.

2010

  • Stone, J.J., Dollarhide*, C., Jinka*, R., Aurand*, K., Thaler, R., Hostetler, C., Clay, D., 2010. Life cycle assessment of a modern Northern Great Plains U.S. swine production facility. Environmental Engineering Science.  27(12): 1009-1018.  http://dx.doi.org/10.1089/ees.2010.005

  • Stone, J.J., Clay, S., Spellman, G., 2010. Tylosin and chlortetracycline effects during swine manure digestion:  influence of sodium azide. Bioresource Technology. 101(24): 9515-9520.  http://dx.doi.org/10.1016/j.biortech.2010.07.116

  • Stetler, L.D., Stone, J.J.  2010. Environmental geology of abandoned uranium mines, Harding County, South Dakota.  In Geologic Field Trips in the Black Hills (eds. M. Terry, E. Duke, J. Tielke).  Bulletin No. 21, Department of Geology and Geological Engineering, South Dakota School of Mines and Technology, Rapid City, SD.  128-138.

2009

  • Paul*, C., Stone, J.J., 2009. Effects of Nickel and Soil Humic Acid during biological hematite reduction by Shewanella putrefaciens.  Environmental Engineering Science. 26(4): 841-848. http://dx.doi.org/10.1089/ees.2008.0254  

  • Kipp*, G., Stone, J.J., Stetler, L.D., 2009. Metal transport in sediments near abandoned uranium mines in Harding County, South Dakota. Applied Geochemistry. 24(2009): 2246–2255. http://dx.doi.org/10.1016/j.apgeochem.2009.09.017

  • Stone, J.J., Clay, S., Zhu*, Z., Wong*, K., Porath*, L., Spellman, G., 2009. Impact of antimicrobial agents tylosin and chlortetracycline during swine manure treatment.  Water Research.  43(2009): 4740–4750. http://dx.doi.org/10.1016/j.watres.2009.08.005

2008

  • Schwalm, A., Stone, J.J., Stetler, L.D. 2008. Abandoned Mine Investigation Report: Metal Contaminant Concentrations at the Abandoned Hilltop #1 and #2, Area H-2, Hanson Operation Uranium Mine Site, Slim Buttes, Harding County, South Dakota.  Report No 10-08. Department of Civil and Environmental Engineering, South Dakota School of Mines and Technology.  Prepared for USDA-USFS Northern Regional Office, Missoula, MT.

2007

  • Stone J.J., Burgos W.D., Royer R.A., and Dempsey B.A., 2007. Effect of natural organic matter on zinc inhibition of biological Fe(III) and nitrate reduction by Shewanella putrefaciens CN32. Environmental Science and Technology. 41(15): 5284-5290.  http://dx.doi.org/10.1021/es062802l

  • Burgos, W.D., Senko, J.D., Dempsey, B.A., Roden, E.E., Stone, J.J., Kemner, K.M., Kelley, S.D., 2007.  Soil humic acid decreases biological uranium(VI) reduction by Shewanella putrefaciens CN32.  Environmental Engineering Science. 24(6): 755-761.  http://dx.doi.org/10.1089/ees.2006.0009

  • Davis, A., Stetler, L.D., Stone, J.J. 2007. Pumping Well Test Analysis: Hell Creek Aquifer, North Cave Hills, Harding County, South Dakota.  Report No 11-07, Department of Geology and Geological Engineering, South Dakota School of Mines and Technology.  Prepared for USDA-USFS Northern Regional Office, Missoula, MT.

  • Stone, J.J., Clay, S., Thaler, R. 2007.  Annual Report: Degradation of antimicrobial agents Tylosin and Chlortetracycline during swine waste treatment.  Prepared for the National Science Foundation, Chemical, Bioengineering, Environmental, and Transport Systems Division, Arlington, VA.

  • Stone, J.J., Stetler, L.D., Schwalm, A. 2007. Final Report: North Cave Hills Abandoned Uranium Mines Impact Investigation. Report No. 04-17, Department of Civil and Environmental Engineering, South Dakota School of Mines and Technology.  Prepared for USDA-USFS Northern Regional Office, Missoula, MT.

2006

  • Stone J.J., Burgos W.D., Royer R.A., and Dempsey B.A., 2006. Impact of zinc on biological Fe(III) and NO3- reduction by Shewanella putrefaciens CN32. Environmental Engineering Science. 23(4): 691-704. http://dx.doi.org/10.1089/ees.2006.23.691

  • Stone J.J., Burgos W.D., Royer R.A., and Dempsey B.A., 2006. Zinc and manganese inhibition of biological hematite reduction. Environmental Engineering Science. 23(5): 859-870.  http://dx.doi.org/10.1089/ees.2006.23.851

  • Stone, J.J., Stetler, L.D., Schwalm, A. 2006. Final Draft Report: North Cave Hills Abandoned Uranium Mines Impact Investigation. Report No. 06-12, Department of Civil and Environmental Engineering, South Dakota School of Mines and Technology.  Prepared for USDA-USFS Northern Regional Office, Missoula, MT.

  • Stone, J.J., Schwalm, A. 2006.  Slaba ‘Flat Top’ Historical Uranium Mine Field Investigation, Ludlow, South Dakota.” Report No. 06-10, Department of Civil and Environmental Engineering, South Dakota School of Mines and Technology.  Prepared for USDA-USFS Northern Regional Office, Missoula, MT.

  • Stone, J.J., Schwalm, A. 2006.  Triangle Mine/Spencer Ranch Historical Uranium Mine Field Investigation, Fall River County, South Dakota. Report No 06-10.2, Department of Civil and Environmental Engineering, South Dakota School of Mines and Technology.  Prepared for USDA-USFS Northern Regional Office, Missoula, MT.

2005

  • Kelly S.D., Kemner K.M., OLoughlin E.J, Boyanov M.I., Stone J.J., Shi Z., Kirkham R., Royer R., Dempsey B., Roden E., Gu B, Burgos W. 2005.  U-Edge XANES Measurements of U(VI) Biologically Reduced by Shewanella putrefaciens with Soil Humic Acids.  Advanced Photon Source Activity Report, Argonne National Lab, Argonne, IL.

2003

  • Burgos, W.D., Fang, Y.L., Royer, R.A., Yeh, G.T., Stone, J.J., Jeon, B.H., Dempsey, B.A., 2003. Reaction-based modeling of quinone-mediated bacterial Iron(III) reduction. Geochimica Cosmochimica Acta. 67(15): 2735-2748.  http://dx.doi.org/10.1016/S0016-7037(03)00105-4 

 

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